Bioinformatics 510-IS1-3BIO-23
Profile of studies: general-academic
Form of study: full-time
Course type: optional
Field: Natural and exact sciences, discipline: Informatics.
Year of study / semester 3 / 5
Prerequisites: (the so-called sequential system of classes and exams):
Introductory subjects:
Fundamentals of structural programming
Introduction to object-oriented programming
Algorithms and data structures
Databases
Lecture: 15
Laboratory: 30
Teaching methods: Teaching materials are prepared in pdf slide format and presented during lectures. Laboratory instructions are made available to students at each class. Consultations are also provided.
ECTS credits: 4
Balance of student workload:
Attendance in classes:
- lecture 15h
- laboratory 30h
Preparation for classes:
- lecture 0h
- laboratory 10h
Familiarisation with the literature: 5h
Reports, class reports, homework: 25h
Preparation for the colloquium: 10h
Participation in consultations: 5h
Quantitative indicators:
Student workload related to classes:
- activities requiring direct participation of the teacher: 50h, 2ECTS
- individual work: 50h, 2 ECTS
Type of course
Prerequisites
Databases
Probabilistic Methods and Statistics
Object-Oriented Programming
Structured Programming
Prerequisites (description)
Course coordinators
Learning outcomes
KP6_WG4, KP6_WG11, KP6_UW3, KP6_UW8,
KP6_UW14, KP6_UK3, KP6_UO1, KP6_UO2, KP6_UU1, KP6_KO1
Assessment criteria
Lecture:
written colloquim
Laboratory:
Completion of projects.
To complete the course positively student has both:
get at least 50% points from written colloquium and 50% points from the lab course.
Bibliography
Python for everyone : programming basics. / Michael Dawson
Bioinformatics and molecular evolution / Paul G. Higgs, Teresa K. Attwood 2008
Introductory Bioinformatics, Fourth Edition. Stefanie Hartmann, Joachim Selbig
Bioinformatics and Functional Genomics, Second Edition, Jonathan Pevsner.
Bioinformatics for Dummies, Second Edition, Jean-Michel Claverie and Cedric Notredame
R For Dummies 2e 2nd Edition, Andrie de Vries
Additional information
Additional information (registration calendar, class conductors, localization and schedules of classes), might be available in the USOSweb system: